Here is a list of all namespace members with links to the namespace documentation for each member:
- a -
- Adaptive
: vg
- add_alt_allele()
: vg
- add_log()
: vg
- add_nodes_and_edges()
: vg
- add_path_to_graph()
: vg
- add_thread_edges_to_set()
: vg
- add_thread_nodes_to_set()
: vg
- addArbitraryTelomerePair()
: vg
- adjacent_mappings()
: vg
- advance_split()
: vg
- alignment_end()
: vg
- alignment_ends()
: vg
- alignment_from_length()
: vg
- alignment_from_path()
: vg
- alignment_is_valid()
: vg
- alignment_middle()
: vg
- alignment_quality_char_to_short()
: vg
- alignment_quality_per_node()
: vg
- alignment_quality_short_to_char()
: vg
- alignment_refpos_to_path_offsets()
: vg
- alignment_set_distance_to_correct()
: vg
- alignment_start()
: vg
- alignment_to_bam()
: vg
- alignment_to_bam_internal()
: vg
- alignment_to_length()
: vg
- alignment_to_sam()
: vg
- alignment_to_sam_internal()
: vg
- allATGC()
: vg
- allATGCN()
: vg
- allele_to_string()
: vg
- append_cigar_operation()
: vg
- append_path()
: vg
- Approx
: vg
- as_handle()
: handlegraph
- as_integer()
: handlegraph
- as_integers()
: handlegraph
- as_path_handle()
: handlegraph
- augment()
: vg
- augment_impl()
: vg